Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CLCN1P35523 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCN1P35523 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCN1P35523 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN1P35523 MIR4492-201ENST00000581627 80 ntBASIC18.05■□□□□ 0.48
CLCN1P35523 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN1P35523 AL356488.2-201ENST00000602755 427 ntBASIC18.05■□□□□ 0.48
CLCN1P35523 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLCN1P35523 AC008667.4-201ENST00000607370 168 ntBASIC18.05■□□□□ 0.48
CLCN1P35523 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCN1P35523 FAM215A-202ENST00000632077 792 ntBASIC18.05■□□□□ 0.48
CLCN1P35523 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN1P35523 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN1P35523 AL512652.2-201ENST00000625156 1716 ntBASIC18.05■□□□□ 0.48
CLCN1P35523 OR2I1P-210ENST00000642037 4691 ntBASIC18.05■□□□□ 0.48
CLCN1P35523 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CLCN1P35523 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN1P35523 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN1P35523 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN1P35523 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN1P35523 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCN1P35523 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN1P35523 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLCN1P35523 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CLCN1P35523 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN1P35523 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN1P35523 SNX33P1-201ENST00000592116 1762 ntBASIC18.04■□□□□ 0.48
CLCN1P35523 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 PTENP1-202ENST00000532280 3996 ntBASIC18.04■□□□□ 0.48
CLCN1P35523 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLCN1P35523 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 FAAHP1-202ENST00000446499 1238 ntBASIC18.04■□□□□ 0.48
CLCN1P35523 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN1P35523 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN1P35523 IGHV3-65-201ENST00000523210 341 ntBASIC18.04■□□□□ 0.48
CLCN1P35523 AC107918.2-201ENST00000530817 355 ntBASIC18.04■□□□□ 0.48
CLCN1P35523 AL160237.2-201ENST00000556165 472 ntBASIC18.04■□□□□ 0.48
CLCN1P35523 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.04■□□□□ 0.48
CLCN1P35523 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 AC092135.3-201ENST00000624151 1846 ntBASIC18.04■□□□□ 0.48
CLCN1P35523 AC068587.6-202ENST00000641839 5619 ntBASIC18.04■□□□□ 0.48
CLCN1P35523 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLCN1P35523 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN1P35523 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLCN1P35523 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 AL139385.1-201ENST00000611744 3272 ntBASIC18.03■□□□□ 0.48
CLCN1P35523 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN1P35523 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN1P35523 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLCN1P35523 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCN1P35523 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN1P35523 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCN1P35523 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN1P35523 MPDU1-223ENST00000582151 728 ntBASIC18.03■□□□□ 0.48
CLCN1P35523 AL049840.3-201ENST00000602669 611 ntBASIC18.03■□□□□ 0.48
CLCN1P35523 GGTLC5P-201ENST00000617623 998 ntBASIC18.03■□□□□ 0.48
CLCN1P35523 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN1P35523 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CLCN1P35523 AL359881.3-201ENST00000602640 1721 ntBASIC18.03■□□□□ 0.48
CLCN1P35523 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN1P35523 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCN1P35523 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLCN1P35523 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLCN1P35523 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CLCN1P35523 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CLCN1P35523 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLCN1P35523 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN1P35523 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN1P35523 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms