Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PTPN6P29350 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN6P29350 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PTPN6P29350 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN6P29350 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN6P29350 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PTPN6P29350 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PTPN6P29350 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.01□□□□□ -0.01
PTPN6P29350 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
PTPN6P29350 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN6P29350 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN6P29350 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN6P29350 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN6P29350 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PTPN6P29350 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN6P29350 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PTPN6P29350 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.01□□□□□ -0.01
PTPN6P29350 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.01□□□□□ -0.01
PTPN6P29350 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN6P29350 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 AC126365.1-201ENST00000578585 1514 ntBASIC15.01□□□□□ -0.01
PTPN6P29350 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PTPN6P29350 AC007326.2-201ENST00000624224 7579 ntBASIC15.01□□□□□ -0.01
PTPN6P29350 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN6P29350 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PTPN6P29350 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15□□□□□ -0.01
PTPN6P29350 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PTPN6P29350 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
PTPN6P29350 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PTPN6P29350 PON3-203ENST00000427422 894 ntTSL 3 BASIC15□□□□□ -0.01
PTPN6P29350 GPS2P2-201ENST00000430745 888 ntBASIC15□□□□□ -0.01
PTPN6P29350 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15□□□□□ -0.01
PTPN6P29350 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15□□□□□ -0.01
PTPN6P29350 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15□□□□□ -0.01
PTPN6P29350 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 AC109322.1-201ENST00000524499 1264 ntBASIC15□□□□□ -0.01
PTPN6P29350 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 SLC25A39P2-201ENST00000537614 270 ntBASIC15□□□□□ -0.01
PTPN6P29350 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15□□□□□ -0.01
PTPN6P29350 LINC00628-201ENST00000628516 1289 ntBASIC15□□□□□ -0.01
PTPN6P29350 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 AGAP7P-201ENST00000582299 2062 ntBASIC15□□□□□ -0.01
PTPN6P29350 AGAP14-201ENST00000624701 2060 ntBASIC15□□□□□ -0.01
PTPN6P29350 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15□□□□□ -0.01
PTPN6P29350 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
PTPN6P29350 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN6P29350 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PTPN6P29350 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PTPN6P29350 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.99□□□□□ -0.01
PTPN6P29350 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.99□□□□□ -0.01
PTPN6P29350 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.99□□□□□ -0.01
PTPN6P29350 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PTPN6P29350 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 CYP4F24P-201ENST00000586049 1580 ntBASIC14.99□□□□□ -0.01
PTPN6P29350 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PTPN6P29350 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms