Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CTGFP29279 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CTGFP29279 PDIA3P2-201ENST00000428073 158 ntBASIC17.44■□□□□ 0.38
CTGFP29279 AC116345.2-201ENST00000512837 523 ntBASIC17.44■□□□□ 0.38
CTGFP29279 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CTGFP29279 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.44■□□□□ 0.38
CTGFP29279 AC020922.3-201ENST00000595064 547 ntBASIC17.44■□□□□ 0.38
CTGFP29279 RN7SL736P-201ENST00000613111 269 ntBASIC17.44■□□□□ 0.38
CTGFP29279 AL353770.1-201ENST00000614915 403 ntBASIC17.44■□□□□ 0.38
CTGFP29279 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.44■□□□□ 0.38
CTGFP29279 AC011491.1-203ENST00000637688 543 ntBASIC17.44■□□□□ 0.38
CTGFP29279 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 FLJ38576-201ENST00000623820 2459 ntBASIC17.44■□□□□ 0.38
CTGFP29279 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.44■□□□□ 0.38
CTGFP29279 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.44■□□□□ 0.38
CTGFP29279 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CTGFP29279 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.44■□□□□ 0.38
CTGFP29279 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 AC004899.1-201ENST00000424687 1714 ntBASIC17.44■□□□□ 0.38
CTGFP29279 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CTGFP29279 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.43■□□□□ 0.38
CTGFP29279 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.43■□□□□ 0.38
CTGFP29279 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CTGFP29279 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.43■□□□□ 0.38
CTGFP29279 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CTGFP29279 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.43■□□□□ 0.38
CTGFP29279 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.43■□□□□ 0.38
CTGFP29279 NPM1P43-201ENST00000558669 786 ntBASIC17.43■□□□□ 0.38
CTGFP29279 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.43■□□□□ 0.38
CTGFP29279 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.43■□□□□ 0.38
CTGFP29279 AC068587.8-201ENST00000641239 219 ntBASIC17.43■□□□□ 0.38
CTGFP29279 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CTGFP29279 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.43■□□□□ 0.38
CTGFP29279 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CTGFP29279 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.43■□□□□ 0.38
CTGFP29279 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTGFP29279 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTGFP29279 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.42■□□□□ 0.38
CTGFP29279 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.42■□□□□ 0.38
CTGFP29279 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CTGFP29279 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 KRT18P66-201ENST00000452970 1269 ntBASIC17.42■□□□□ 0.38
CTGFP29279 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 MARK2P5-201ENST00000507649 634 ntBASIC17.42■□□□□ 0.38
CTGFP29279 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.42■□□□□ 0.38
CTGFP29279 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.42■□□□□ 0.38
CTGFP29279 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.42■□□□□ 0.38
CTGFP29279 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTGFP29279 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.42■□□□□ 0.38
CTGFP29279 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.42■□□□□ 0.38
CTGFP29279 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CTGFP29279 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.42■□□□□ 0.38
CTGFP29279 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CTGFP29279 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CTGFP29279 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CTGFP29279 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CTGFP29279 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CTGFP29279 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms