Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC092127.1-201ENST00000567093 3455 ntBASIC15.95■□□□□ 0.14
HLA-DPA1P20036 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AC092850.2-201ENST00000623821 2697 ntBASIC15.95■□□□□ 0.14
HLA-DPA1P20036 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DPA1P20036 CICP6-201ENST00000457191 2729 ntBASIC15.95■□□□□ 0.14
HLA-DPA1P20036 AC105250.1-201ENST00000509378 2057 ntBASIC15.95■□□□□ 0.14
HLA-DPA1P20036 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 TARDBPP1-201ENST00000442013 1203 ntBASIC15.94■□□□□ 0.14
HLA-DPA1P20036 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 AC027796.2-201ENST00000575326 344 ntBASIC15.94■□□□□ 0.14
HLA-DPA1P20036 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 AC106028.4-201ENST00000614509 607 ntBASIC15.94■□□□□ 0.14
HLA-DPA1P20036 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.94■□□□□ 0.14
HLA-DPA1P20036 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 AC046158.3-201ENST00000624947 2558 ntBASIC15.94■□□□□ 0.14
HLA-DPA1P20036 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DPA1P20036 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 MIR943-201ENST00000401286 94 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 TREML5P-201ENST00000421694 576 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC092580.3-201ENST00000430932 139 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC097493.3-201ENST00000509725 367 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 RFPL4AP1-201ENST00000530883 850 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AL512361.1-201ENST00000554200 418 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC025048.3-201ENST00000590609 569 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AC005702.4-201ENST00000618393 416 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 AL139384.1-201ENST00000612143 3047 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DPA1P20036 Z97205.2-201ENST00000564697 1639 ntBASIC15.93■□□□□ 0.14
HLA-DPA1P20036 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms