Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.57■□□□□ 0.24
PDGFRAP16234 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PDGFRAP16234 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.57■□□□□ 0.24
PDGFRAP16234 FAM8A3P-201ENST00000427218 844 ntBASIC16.57■□□□□ 0.24
PDGFRAP16234 AC241585.1-201ENST00000433527 519 ntBASIC16.57■□□□□ 0.24
PDGFRAP16234 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.57■□□□□ 0.24
PDGFRAP16234 AL512638.1-201ENST00000457493 794 ntBASIC16.57■□□□□ 0.24
PDGFRAP16234 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFRAP16234 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.57■□□□□ 0.24
PDGFRAP16234 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.57■□□□□ 0.24
PDGFRAP16234 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.57■□□□□ 0.24
PDGFRAP16234 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.57■□□□□ 0.24
PDGFRAP16234 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 AL590560.3-201ENST00000623350 461 ntBASIC16.57■□□□□ 0.24
PDGFRAP16234 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFRAP16234 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PDGFRAP16234 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.57■□□□□ 0.24
PDGFRAP16234 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 AC068587.6-202ENST00000641839 5619 ntBASIC16.57■□□□□ 0.24
PDGFRAP16234 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFRAP16234 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDGFRAP16234 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 AC127383.1-201ENST00000444697 1800 ntBASIC16.56■□□□□ 0.24
PDGFRAP16234 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PDGFRAP16234 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFRAP16234 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PDGFRAP16234 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PDGFRAP16234 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFRAP16234 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFRAP16234 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PDGFRAP16234 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PDGFRAP16234 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 TARDBPP1-201ENST00000442013 1203 ntBASIC16.56■□□□□ 0.24
PDGFRAP16234 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFRAP16234 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.56■□□□□ 0.24
PDGFRAP16234 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PDGFRAP16234 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PDGFRAP16234 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFRAP16234 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PDGFRAP16234 AC087481.3-201ENST00000602886 1894 ntBASIC16.56■□□□□ 0.24
PDGFRAP16234 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
PDGFRAP16234 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 NORAD-201ENST00000565493 5339 ntBASIC16.56■□□□□ 0.24
PDGFRAP16234 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFRAP16234 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFRAP16234 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 AC009090.5-201ENST00000624886 2285 ntBASIC16.56■□□□□ 0.24
PDGFRAP16234 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFRAP16234 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PDGFRAP16234 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PDGFRAP16234 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFRAP16234 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 AC073347.1-201ENST00000421633 2643 ntBASIC16.55■□□□□ 0.24
PDGFRAP16234 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFRAP16234 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFRAP16234 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms