Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 AC006453.4-201ENST00000636949 1252 ntBASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CSB-PGBD3P0DP91 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 AC015818.8-201ENST00000587907 1519 ntBASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 AC005077.2-201ENST00000449786 690 ntBASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 GAPDHP40-201ENST00000505218 1006 ntBASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 SCARNA20.5-201ENST00000516991 142 ntBASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 RN7SL190P-201ENST00000582519 257 ntBASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 AC020914.3-201ENST00000594712 304 ntBASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 ECM1P1-201ENST00000604092 1279 ntBASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSB-PGBD3P0DP91 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AC004898.1-201ENST00000451057 766 ntBASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AL096828.3-201ENST00000615354 462 ntBASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AC138028.6-201ENST00000616106 1482 ntBASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 AL354989.2-201ENST00000435838 1540 ntBASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSB-PGBD3P0DP91 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms