Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 MIR3687-1-201ENST00000614492 61 ntBASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 AC087481.3-201ENST00000602886 1894 ntBASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 AC020658.6-201ENST00000623564 1870 ntBASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IGHV3-43DP0DP04 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 CYP4F24P-201ENST00000586049 1580 ntBASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AC009090.5-201ENST00000624886 2285 ntBASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AC004461.1-201ENST00000412461 403 ntBASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 FAM58DP-201ENST00000428076 619 ntBASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AC112482.1-201ENST00000492080 688 ntBASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AC092865.5-201ENST00000545435 363 ntBASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 OR2I1P-209ENST00000641730 5365 ntBASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 AC011270.2-201ENST00000624293 2550 ntBASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IGHV3-43DP0DP04 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IGHV3-43DP0DP04 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms