Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 SLC22A20-204ENST00000530038 1673 ntBASIC11.86□□□□□ -0.51
SMIM17P0DL12 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 AC009090.5-201ENST00000624886 2285 ntBASIC11.86□□□□□ -0.51
SMIM17P0DL12 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SMIM17P0DL12 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.86□□□□□ -0.51
SMIM17P0DL12 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 ARMC10P1-201ENST00000313754 855 ntBASIC11.85□□□□□ -0.51
SMIM17P0DL12 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 MTDHP4-201ENST00000600287 670 ntBASIC11.85□□□□□ -0.51
SMIM17P0DL12 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 PGM5P2-202ENST00000637225 1043 ntBASIC11.85□□□□□ -0.51
SMIM17P0DL12 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 AP000550.4-202ENST00000639755 178 ntBASIC11.85□□□□□ -0.51
SMIM17P0DL12 AL805961.1-202ENST00000641562 540 ntBASIC11.85□□□□□ -0.51
SMIM17P0DL12 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.85□□□□□ -0.51
SMIM17P0DL12 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SMIM17P0DL12 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.84□□□□□ -0.51
SMIM17P0DL12 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM17P0DL12 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
SMIM17P0DL12 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM17P0DL12 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SMIM17P0DL12 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms