Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 MIR6069-201ENST00000620069 79 ntBASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 KRT8P12-202ENST00000472924 1397 ntBASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 GGT4P-201ENST00000623672 1708 ntBASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.34■□□□□ 0.05
CCNYL3P0C7X3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCNYL3P0C7X3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 DFFBP1-201ENST00000433250 979 ntBASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 AC004840.1-201ENST00000636359 365 ntBASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 AL596087.1-201ENST00000400979 1969 ntBASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCNYL3P0C7X3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 PCGF3-213ENST00000620529 1899 ntBASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 AC098614.1-201ENST00000368528 745 ntBASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 DOC2GP-202ENST00000514950 1163 ntBASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 SDHAP3-202ENST00000515467 728 ntBASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.32■□□□□ 0.04
CCNYL3P0C7X3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms