Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CD48P09326 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.35■□□□□ 0.21
CD48P09326 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CD48P09326 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.35■□□□□ 0.21
CD48P09326 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.35■□□□□ 0.21
CD48P09326 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.35■□□□□ 0.21
CD48P09326 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.35■□□□□ 0.21
CD48P09326 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.35■□□□□ 0.21
CD48P09326 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 AL138828.2-201ENST00000615812 383 ntBASIC16.35■□□□□ 0.21
CD48P09326 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.35■□□□□ 0.21
CD48P09326 AC139530.3-201ENST00000620344 690 ntBASIC16.35■□□□□ 0.21
CD48P09326 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 TUBB3P1-201ENST00000405796 1332 ntBASIC16.35■□□□□ 0.21
CD48P09326 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.35■□□□□ 0.21
CD48P09326 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CD48P09326 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CD48P09326 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD48P09326 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CD48P09326 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CD48P09326 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CD48P09326 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CD48P09326 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.34■□□□□ 0.21
CD48P09326 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.34■□□□□ 0.21
CD48P09326 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CD48P09326 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.34■□□□□ 0.21
CD48P09326 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.34■□□□□ 0.21
CD48P09326 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.34■□□□□ 0.21
CD48P09326 AC004449.1-201ENST00000564240 433 ntBASIC16.34■□□□□ 0.21
CD48P09326 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.34■□□□□ 0.21
CD48P09326 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CD48P09326 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CD48P09326 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.34■□□□□ 0.21
CD48P09326 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.34■□□□□ 0.21
CD48P09326 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.34■□□□□ 0.21
CD48P09326 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.34■□□□□ 0.21
CD48P09326 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD48P09326 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.34■□□□□ 0.21
CD48P09326 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD48P09326 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
CD48P09326 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.33■□□□□ 0.21
CD48P09326 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.33■□□□□ 0.21
CD48P09326 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD48P09326 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.33■□□□□ 0.21
CD48P09326 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
CD48P09326 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CD48P09326 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.33■□□□□ 0.21
CD48P09326 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms