Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.84■□□□□ 0.13
MMP2P08253 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
MMP2P08253 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
MMP2P08253 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.84■□□□□ 0.13
MMP2P08253 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MMP2P08253 AL121723.1-201ENST00000445194 1519 ntBASIC15.84■□□□□ 0.13
MMP2P08253 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
MMP2P08253 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.83■□□□□ 0.13
MMP2P08253 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MMP2P08253 AC084364.1-201ENST00000551967 1556 ntBASIC15.83■□□□□ 0.13
MMP2P08253 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MMP2P08253 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.83■□□□□ 0.13
MMP2P08253 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MMP2P08253 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.83■□□□□ 0.13
MMP2P08253 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MMP2P08253 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.83■□□□□ 0.13
MMP2P08253 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
MMP2P08253 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
MMP2P08253 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP2P08253 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
MMP2P08253 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP2P08253 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 MEIS3P1-201ENST00000495167 958 ntBASIC15.83■□□□□ 0.12
MMP2P08253 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MMP2P08253 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP2P08253 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP2P08253 SPCS2P1-201ENST00000561636 679 ntBASIC15.83■□□□□ 0.12
MMP2P08253 AJ011932.1-201ENST00000621707 465 ntBASIC15.83■□□□□ 0.12
MMP2P08253 AL158212.4-201ENST00000624062 1286 ntBASIC15.83■□□□□ 0.12
MMP2P08253 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MMP2P08253 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MMP2P08253 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.83■□□□□ 0.12
MMP2P08253 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
MMP2P08253 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 AC138969.3-201ENST00000546612 1459 ntBASIC15.83■□□□□ 0.12
MMP2P08253 AC138932.2-201ENST00000548268 1459 ntBASIC15.83■□□□□ 0.12
MMP2P08253 AC126755.4-201ENST00000549796 1459 ntBASIC15.83■□□□□ 0.12
MMP2P08253 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.83■□□□□ 0.12
MMP2P08253 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MMP2P08253 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP2P08253 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP2P08253 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
MMP2P08253 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
MMP2P08253 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 AL133267.1-201ENST00000398220 340 ntBASIC15.82■□□□□ 0.12
MMP2P08253 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.82■□□□□ 0.12
MMP2P08253 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.82■□□□□ 0.12
MMP2P08253 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP2P08253 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 TIMM17BP1-201ENST00000545713 516 ntBASIC15.82■□□□□ 0.12
MMP2P08253 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.82■□□□□ 0.12
MMP2P08253 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.82■□□□□ 0.12
MMP2P08253 AL096865.1-201ENST00000606796 927 ntBASIC15.82■□□□□ 0.12
MMP2P08253 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.82■□□□□ 0.12
MMP2P08253 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
MMP2P08253 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
MMP2P08253 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MMP2P08253 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms