Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 FER1L4-210ENST00000615531 5998 ntBASIC15.91■□□□□ 0.14
RETP07949 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RETP07949 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.91■□□□□ 0.14
RETP07949 ZNF767P-206ENST00000513792 565 ntBASIC15.91■□□□□ 0.14
RETP07949 AP001889.1-201ENST00000525414 633 ntBASIC15.91■□□□□ 0.14
RETP07949 AC068587.3-201ENST00000526613 355 ntBASIC15.91■□□□□ 0.14
RETP07949 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.91■□□□□ 0.14
RETP07949 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.91■□□□□ 0.14
RETP07949 C2orf69P2-201ENST00000562032 1123 ntBASIC15.91■□□□□ 0.14
RETP07949 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.91■□□□□ 0.14
RETP07949 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.91■□□□□ 0.14
RETP07949 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RETP07949 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RETP07949 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RETP07949 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.91■□□□□ 0.14
RETP07949 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RETP07949 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RETP07949 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RETP07949 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
RETP07949 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.91■□□□□ 0.14
RETP07949 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.9■□□□□ 0.14
RETP07949 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RETP07949 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.9■□□□□ 0.14
RETP07949 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RETP07949 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RETP07949 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RETP07949 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RETP07949 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RETP07949 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.9■□□□□ 0.14
RETP07949 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RETP07949 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.9■□□□□ 0.14
RETP07949 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.9■□□□□ 0.14
RETP07949 RPL13AP20-201ENST00000459725 609 ntBASIC15.9■□□□□ 0.14
RETP07949 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.9■□□□□ 0.14
RETP07949 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.9■□□□□ 0.14
RETP07949 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.9■□□□□ 0.14
RETP07949 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.9■□□□□ 0.14
RETP07949 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.9■□□□□ 0.14
RETP07949 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.9■□□□□ 0.14
RETP07949 RN7SL560P-201ENST00000577943 264 ntBASIC15.9■□□□□ 0.14
RETP07949 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.9■□□□□ 0.14
RETP07949 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.9■□□□□ 0.14
RETP07949 AL365330.1-201ENST00000607459 531 ntBASIC15.9■□□□□ 0.14
RETP07949 AL391069.4-201ENST00000609583 481 ntBASIC15.9■□□□□ 0.14
RETP07949 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.9■□□□□ 0.14
RETP07949 AC020765.3-201ENST00000613051 740 ntBASIC15.9■□□□□ 0.14
RETP07949 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.9■□□□□ 0.14
RETP07949 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.9■□□□□ 0.14
RETP07949 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.9■□□□□ 0.14
RETP07949 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.9■□□□□ 0.14
RETP07949 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.9■□□□□ 0.14
RETP07949 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RETP07949 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RETP07949 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.89■□□□□ 0.14
RETP07949 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
RETP07949 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.89■□□□□ 0.13
RETP07949 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.89■□□□□ 0.13
RETP07949 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RETP07949 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RETP07949 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms