Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.3■□□□□ 0.84
COL5A2P05997 AC004899.1-201ENST00000424687 1714 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 AC069224.1-201ENST00000566372 1715 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 AC055811.4-201ENST00000624039 1754 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
COL5A2P05997 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.3■□□□□ 0.84
COL5A2P05997 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.3■□□□□ 0.84
COL5A2P05997 HLA-K-203ENST00000430151 1046 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 AC104784.1-201ENST00000473096 294 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 AC021723.1-201ENST00000486306 515 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC20.3■□□□□ 0.84
COL5A2P05997 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COL5A2P05997 AC009955.4-201ENST00000597192 544 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 AL162426.1-201ENST00000624141 743 ntBASIC20.3■□□□□ 0.84
COL5A2P05997 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
COL5A2P05997 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.3■□□□□ 0.84
COL5A2P05997 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.29■□□□□ 0.84
COL5A2P05997 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
COL5A2P05997 AGGF1P2-201ENST00000426656 2106 ntBASIC20.29■□□□□ 0.84
COL5A2P05997 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
COL5A2P05997 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.29■□□□□ 0.84
COL5A2P05997 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL5A2P05997 AC084364.1-201ENST00000551967 1556 ntBASIC20.29■□□□□ 0.84
COL5A2P05997 AC011676.5-201ENST00000624864 2660 ntBASIC20.29■□□□□ 0.84
COL5A2P05997 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
COL5A2P05997 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
COL5A2P05997 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.29■□□□□ 0.84
COL5A2P05997 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.29■□□□□ 0.84
COL5A2P05997 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
COL5A2P05997 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 AC125604.1-201ENST00000496255 707 ntBASIC20.29■□□□□ 0.84
COL5A2P05997 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.29■□□□□ 0.84
COL5A2P05997 AC005324.6-201ENST00000587972 613 ntBASIC20.29■□□□□ 0.84
COL5A2P05997 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
COL5A2P05997 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.29■□□□□ 0.84
COL5A2P05997 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COL5A2P05997 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.28■□□□□ 0.84
COL5A2P05997 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.28■□□□□ 0.84
COL5A2P05997 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL5A2P05997 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COL5A2P05997 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
COL5A2P05997 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.28■□□□□ 0.84
COL5A2P05997 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.28■□□□□ 0.84
COL5A2P05997 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.28■□□□□ 0.84
COL5A2P05997 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 AL160314.3-201ENST00000556041 767 ntBASIC20.28■□□□□ 0.84
COL5A2P05997 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 AL353770.1-201ENST00000614915 403 ntBASIC20.28■□□□□ 0.84
COL5A2P05997 AL353726.2-201ENST00000623259 884 ntBASIC20.28■□□□□ 0.84
COL5A2P05997 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.28■□□□□ 0.84
COL5A2P05997 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COL5A2P05997 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COL5A2P05997 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL5A2P05997 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC20.27■□□□□ 0.84
COL5A2P05997 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
COL5A2P05997 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL5A2P05997 MESTP3-201ENST00000503460 968 ntBASIC20.27■□□□□ 0.84
COL5A2P05997 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
COL5A2P05997 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms