Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 ARMC10P1-201ENST00000313754 855 ntBASIC11.95□□□□□ -0.5
HLA-DQA1P01909 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 MIR1224-201ENST00000408193 85 ntBASIC11.95□□□□□ -0.5
HLA-DQA1P01909 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 SPDYE13P-201ENST00000445314 798 ntBASIC11.95□□□□□ -0.5
HLA-DQA1P01909 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 GUSBP12-201ENST00000513727 720 ntBASIC11.95□□□□□ -0.5
HLA-DQA1P01909 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DQA1P01909 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 AL928921.2-201ENST00000641325 2442 ntBASIC11.94□□□□□ -0.5
HLA-DQA1P01909 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 AL031133.1-201ENST00000406807 723 ntBASIC11.94□□□□□ -0.5
HLA-DQA1P01909 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 BX276092.5-203ENST00000456199 560 ntBASIC11.94□□□□□ -0.5
HLA-DQA1P01909 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 AC011498.5-201ENST00000592027 486 ntBASIC11.94□□□□□ -0.5
HLA-DQA1P01909 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 AC010331.1-201ENST00000611423 582 ntBASIC11.94□□□□□ -0.5
HLA-DQA1P01909 IGHV3-41-201ENST00000613121 348 ntBASIC11.94□□□□□ -0.5
HLA-DQA1P01909 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 AL353732.1-201ENST00000569618 1459 ntBASIC11.94□□□□□ -0.5
HLA-DQA1P01909 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
HLA-DQA1P01909 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms