Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC010327.5-201ENST00000586923 3061 ntBASIC12.56□□□□□ -0.4
IFNA1P01562 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 SIGLEC16-201ENST00000599858 1437 ntBASIC12.56□□□□□ -0.4
IFNA1P01562 REXO1L1P-201ENST00000379010 6598 ntBASIC12.56□□□□□ -0.4
IFNA1P01562 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
IFNA1P01562 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.56□□□□□ -0.4
IFNA1P01562 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.56□□□□□ -0.4
IFNA1P01562 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 TSPY7P-201ENST00000431358 1114 ntBASIC12.56□□□□□ -0.4
IFNA1P01562 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 AL441883.1-201ENST00000566170 1045 ntBASIC12.56□□□□□ -0.4
IFNA1P01562 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.56□□□□□ -0.4
IFNA1P01562 AC090616.6-201ENST00000582640 721 ntBASIC12.56□□□□□ -0.4
IFNA1P01562 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
IFNA1P01562 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
IFNA1P01562 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.56□□□□□ -0.4
IFNA1P01562 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 ZBED1P1-201ENST00000502364 1930 ntBASIC12.55□□□□□ -0.4
IFNA1P01562 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
IFNA1P01562 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.55□□□□□ -0.4
IFNA1P01562 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.55□□□□□ -0.4
IFNA1P01562 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.55□□□□□ -0.4
IFNA1P01562 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 IGHV3-41-201ENST00000613121 348 ntBASIC12.55□□□□□ -0.4
IFNA1P01562 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
IFNA1P01562 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.55□□□□□ -0.4
IFNA1P01562 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
IFNA1P01562 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.55□□□□□ -0.4
IFNA1P01562 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.55□□□□□ -0.4
IFNA1P01562 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
IFNA1P01562 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
IFNA1P01562 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms