Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 AC004923.1-202ENST00000642106 209 ntBASIC17.75■□□□□ 0.43
ALDH1A1P00352 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ALDH1A1P00352 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.75■□□□□ 0.43
ALDH1A1P00352 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.74■□□□□ 0.43
ALDH1A1P00352 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 AF254983.2-201ENST00000612331 135 ntBASIC17.74■□□□□ 0.43
ALDH1A1P00352 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 AC103691.2-201ENST00000618824 433 ntBASIC17.74■□□□□ 0.43
ALDH1A1P00352 AL136295.7-201ENST00000619226 1200 ntBASIC17.74■□□□□ 0.43
ALDH1A1P00352 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.74■□□□□ 0.43
ALDH1A1P00352 AL157791.1-201ENST00000553667 1699 ntBASIC17.74■□□□□ 0.43
ALDH1A1P00352 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ALDH1A1P00352 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 AL136309.1-201ENST00000403917 691 ntBASIC17.73■□□□□ 0.43
ALDH1A1P00352 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 MARK2P5-201ENST00000507649 634 ntBASIC17.73■□□□□ 0.43
ALDH1A1P00352 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ALDH1A1P00352 AC006453.1-201ENST00000636037 1257 ntBASIC17.73■□□□□ 0.43
ALDH1A1P00352 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ALDH1A1P00352 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms