Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 AC009090.5-201ENST00000624886 2285 ntBASIC18.75■□□□□ 0.59
MBD4O95243 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 AC127383.1-201ENST00000444697 1800 ntBASIC18.75■□□□□ 0.59
MBD4O95243 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 AL133267.1-201ENST00000398220 340 ntBASIC18.75■□□□□ 0.59
MBD4O95243 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
MBD4O95243 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.75■□□□□ 0.59
MBD4O95243 VDAC1P7-201ENST00000462417 847 ntBASIC18.75■□□□□ 0.59
MBD4O95243 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.75■□□□□ 0.59
MBD4O95243 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.75■□□□□ 0.59
MBD4O95243 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.75■□□□□ 0.59
MBD4O95243 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 IGHV3-72-202ENST00000621503 303 ntBASIC18.75■□□□□ 0.59
MBD4O95243 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MBD4O95243 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MBD4O95243 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MBD4O95243 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD4O95243 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
MBD4O95243 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MBD4O95243 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MBD4O95243 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD4O95243 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MBD4O95243 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.74■□□□□ 0.59
MBD4O95243 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.74■□□□□ 0.59
MBD4O95243 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD4O95243 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD4O95243 AC239800.4-201ENST00000603712 296 ntBASIC18.74■□□□□ 0.59
MBD4O95243 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD4O95243 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MBD4O95243 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
MBD4O95243 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.74■□□□□ 0.59
MBD4O95243 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.74■□□□□ 0.59
MBD4O95243 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MBD4O95243 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
MBD4O95243 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MBD4O95243 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
MBD4O95243 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MBD4O95243 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.73■□□□□ 0.59
MBD4O95243 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.73■□□□□ 0.59
MBD4O95243 CR383656.12-201ENST00000549567 513 ntBASIC18.73■□□□□ 0.59
MBD4O95243 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.73■□□□□ 0.59
MBD4O95243 AL359711.2-201ENST00000563105 872 ntBASIC18.73■□□□□ 0.59
MBD4O95243 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.73■□□□□ 0.59
MBD4O95243 AC132938.2-201ENST00000579188 680 ntBASIC18.73■□□□□ 0.59
MBD4O95243 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
MBD4O95243 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MBD4O95243 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.73■□□□□ 0.59
MBD4O95243 AL591163.1-201ENST00000641757 987 ntBASIC18.73■□□□□ 0.59
MBD4O95243 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms