Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.67■□□□□ 0.26
RTN3O95197 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.67■□□□□ 0.26
RTN3O95197 LINC01115-203ENST00000606068 577 ntBASIC16.67■□□□□ 0.26
RTN3O95197 AC099568.2-201ENST00000609194 695 ntBASIC16.67■□□□□ 0.26
RTN3O95197 AC116165.1-201ENST00000611806 668 ntBASIC16.67■□□□□ 0.26
RTN3O95197 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RTN3O95197 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTN3O95197 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTN3O95197 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
RTN3O95197 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 AC006449.5-201ENST00000610658 2098 ntBASIC16.66■□□□□ 0.26
RTN3O95197 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.66■□□□□ 0.26
RTN3O95197 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 RPL13P2-201ENST00000440687 659 ntBASIC16.66■□□□□ 0.26
RTN3O95197 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.66■□□□□ 0.26
RTN3O95197 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.66■□□□□ 0.26
RTN3O95197 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 HNRNPUP1-201ENST00000554987 333 ntBASIC16.66■□□□□ 0.26
RTN3O95197 AC005225.4-201ENST00000557330 545 ntBASIC16.66■□□□□ 0.26
RTN3O95197 RRP7BP-205ENST00000566851 833 ntBASIC16.66■□□□□ 0.26
RTN3O95197 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
RTN3O95197 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.66■□□□□ 0.26
RTN3O95197 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RTN3O95197 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.66■□□□□ 0.26
RTN3O95197 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 AC079328.2-201ENST00000561241 3354 ntBASIC16.66■□□□□ 0.26
RTN3O95197 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.66■□□□□ 0.26
RTN3O95197 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RTN3O95197 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 AP005018.1-201ENST00000525475 301 ntBASIC16.65■□□□□ 0.26
RTN3O95197 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.65■□□□□ 0.26
RTN3O95197 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.65■□□□□ 0.26
RTN3O95197 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.65■□□□□ 0.26
RTN3O95197 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RTN3O95197 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 CYP2T1P-202ENST00000641596 2535 ntBASIC16.65■□□□□ 0.26
RTN3O95197 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RTN3O95197 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms