Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.6■□□□□ 0.41
CLSTN1O94985 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.6■□□□□ 0.41
CLSTN1O94985 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 AL136379.1-201ENST00000623471 2642 ntBASIC17.6■□□□□ 0.41
CLSTN1O94985 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLSTN1O94985 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLSTN1O94985 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.59■□□□□ 0.41
CLSTN1O94985 AC132872.4-202ENST00000622924 2756 ntBASIC17.59■□□□□ 0.41
CLSTN1O94985 AC092850.2-201ENST00000623821 2697 ntBASIC17.59■□□□□ 0.41
CLSTN1O94985 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.59■□□□□ 0.41
CLSTN1O94985 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.59■□□□□ 0.41
CLSTN1O94985 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.59■□□□□ 0.41
CLSTN1O94985 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.59■□□□□ 0.41
CLSTN1O94985 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.59■□□□□ 0.41
CLSTN1O94985 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.59■□□□□ 0.41
CLSTN1O94985 KRT8P23-201ENST00000560090 1207 ntBASIC17.59■□□□□ 0.41
CLSTN1O94985 AC004449.1-201ENST00000564240 433 ntBASIC17.59■□□□□ 0.41
CLSTN1O94985 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.59■□□□□ 0.41
CLSTN1O94985 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
CLSTN1O94985 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.59■□□□□ 0.41
CLSTN1O94985 MIR6080-201ENST00000617359 66 ntBASIC17.59■□□□□ 0.41
CLSTN1O94985 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.59■□□□□ 0.41
CLSTN1O94985 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLSTN1O94985 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CLSTN1O94985 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.59■□□□□ 0.41
CLSTN1O94985 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLSTN1O94985 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.59■□□□□ 0.41
CLSTN1O94985 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CLSTN1O94985 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLSTN1O94985 MIR193BHG-211ENST00000641433 5365 ntBASIC17.58■□□□□ 0.41
CLSTN1O94985 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLSTN1O94985 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLSTN1O94985 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLSTN1O94985 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLSTN1O94985 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
CLSTN1O94985 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLSTN1O94985 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLSTN1O94985 AP002414.2-201ENST00000591780 3365 ntBASIC17.58■□□□□ 0.41
CLSTN1O94985 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLSTN1O94985 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.58■□□□□ 0.41
CLSTN1O94985 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.58■□□□□ 0.41
CLSTN1O94985 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLSTN1O94985 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.58■□□□□ 0.4
CLSTN1O94985 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CLSTN1O94985 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.58■□□□□ 0.4
CLSTN1O94985 AC006538.3-201ENST00000612495 578 ntBASIC17.58■□□□□ 0.4
CLSTN1O94985 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLSTN1O94985 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.58■□□□□ 0.4
CLSTN1O94985 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLSTN1O94985 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLSTN1O94985 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.58■□□□□ 0.4
CLSTN1O94985 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.57■□□□□ 0.4
CLSTN1O94985 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLSTN1O94985 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.57■□□□□ 0.4
CLSTN1O94985 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CLSTN1O94985 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CLSTN1O94985 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLSTN1O94985 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms