Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.06■□□□□ 0.16
PMPCBO75439 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PMPCBO75439 AC009090.5-201ENST00000624886 2285 ntBASIC16.06■□□□□ 0.16
PMPCBO75439 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.06■□□□□ 0.16
PMPCBO75439 AC020658.6-201ENST00000623564 1870 ntBASIC16.06■□□□□ 0.16
PMPCBO75439 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.06■□□□□ 0.16
PMPCBO75439 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PMPCBO75439 FO538757.1-201ENST00000623083 1397 ntBASIC16.06■□□□□ 0.16
PMPCBO75439 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.06■□□□□ 0.16
PMPCBO75439 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PMPCBO75439 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.06■□□□□ 0.16
PMPCBO75439 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.06■□□□□ 0.16
PMPCBO75439 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.06■□□□□ 0.16
PMPCBO75439 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.06■□□□□ 0.16
PMPCBO75439 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.06■□□□□ 0.16
PMPCBO75439 AC015911.4-201ENST00000588022 1070 ntBASIC16.06■□□□□ 0.16
PMPCBO75439 AC073592.8-201ENST00000624126 511 ntBASIC16.06■□□□□ 0.16
PMPCBO75439 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PMPCBO75439 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PMPCBO75439 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PMPCBO75439 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 AC105250.1-201ENST00000509378 2057 ntBASIC16.06■□□□□ 0.16
PMPCBO75439 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PMPCBO75439 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PMPCBO75439 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PMPCBO75439 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PMPCBO75439 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 LINC00554-201ENST00000564841 3011 ntBASIC16.05■□□□□ 0.16
PMPCBO75439 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.05■□□□□ 0.16
PMPCBO75439 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.05■□□□□ 0.16
PMPCBO75439 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 HLA-V-204ENST00000476601 1289 ntBASIC16.05■□□□□ 0.16
PMPCBO75439 AC067863.1-201ENST00000494933 530 ntBASIC16.05■□□□□ 0.16
PMPCBO75439 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.05■□□□□ 0.16
PMPCBO75439 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.05■□□□□ 0.16
PMPCBO75439 AC027369.6-201ENST00000525520 931 ntBASIC16.05■□□□□ 0.16
PMPCBO75439 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.05■□□□□ 0.16
PMPCBO75439 AC140878.1-201ENST00000565277 250 ntBASIC16.05■□□□□ 0.16
PMPCBO75439 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.05■□□□□ 0.16
PMPCBO75439 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PMPCBO75439 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.05■□□□□ 0.16
PMPCBO75439 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PMPCBO75439 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.05■□□□□ 0.16
PMPCBO75439 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 SSR4P1-203ENST00000599569 2260 ntBASIC16.05■□□□□ 0.16
PMPCBO75439 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PMPCBO75439 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.04■□□□□ 0.16
PMPCBO75439 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PMPCBO75439 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms