Protein–RNA interactions for Protein: O75164

KDM4A, Lysine-specific demethylase 4A, humanhuman

Predictions only

Length 1,064 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4AO75164 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KDM4AO75164 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
KDM4AO75164 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KDM4AO75164 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KDM4AO75164 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KDM4AO75164 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KDM4AO75164 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KDM4AO75164 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KDM4AO75164 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.89■□□□□ 0.61
KDM4AO75164 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.88■□□□□ 0.61
KDM4AO75164 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 LINC02228-204ENST00000642115 2962 ntBASIC18.88■□□□□ 0.61
KDM4AO75164 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.88■□□□□ 0.61
KDM4AO75164 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 LRRFIP1P1-201ENST00000498774 2246 ntBASIC18.88■□□□□ 0.61
KDM4AO75164 AC013268.4-201ENST00000637413 2228 ntBASIC18.88■□□□□ 0.61
KDM4AO75164 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 AZGP1P1-201ENST00000411909 902 ntBASIC18.88■□□□□ 0.61
KDM4AO75164 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.88■□□□□ 0.61
KDM4AO75164 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 AL512361.1-201ENST00000554200 418 ntBASIC18.88■□□□□ 0.61
KDM4AO75164 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.88■□□□□ 0.61
KDM4AO75164 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 AC099063.4-201ENST00000641099 1602 ntBASIC18.88■□□□□ 0.61
KDM4AO75164 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.88■□□□□ 0.61
KDM4AO75164 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 AC011477.6-201ENST00000604980 1927 ntBASIC18.88■□□□□ 0.61
KDM4AO75164 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KDM4AO75164 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.88■□□□□ 0.61
KDM4AO75164 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KDM4AO75164 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
KDM4AO75164 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.87■□□□□ 0.61
KDM4AO75164 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.87■□□□□ 0.61
KDM4AO75164 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.87■□□□□ 0.61
KDM4AO75164 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.87■□□□□ 0.61
KDM4AO75164 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
KDM4AO75164 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.87■□□□□ 0.61
KDM4AO75164 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.87■□□□□ 0.61
KDM4AO75164 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.87■□□□□ 0.61
KDM4AO75164 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.87■□□□□ 0.61
KDM4AO75164 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
KDM4AO75164 NORAD-201ENST00000565493 5339 ntBASIC18.87■□□□□ 0.61
KDM4AO75164 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.87■□□□□ 0.61
KDM4AO75164 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.87■□□□□ 0.61
KDM4AO75164 AL844908.2-201ENST00000609461 460 ntBASIC18.87■□□□□ 0.61
KDM4AO75164 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KDM4AO75164 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KDM4AO75164 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
KDM4AO75164 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KDM4AO75164 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KDM4AO75164 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KDM4AO75164 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC18.86■□□□□ 0.61
KDM4AO75164 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KDM4AO75164 AP005117.1-202ENST00000581724 1908 ntBASIC18.86■□□□□ 0.61
KDM4AO75164 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KDM4AO75164 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.86■□□□□ 0.61
KDM4AO75164 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KDM4AO75164 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KDM4AO75164 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.86■□□□□ 0.61
KDM4AO75164 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KDM4AO75164 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
KDM4AO75164 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.86■□□□□ 0.61
KDM4AO75164 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.86■□□□□ 0.61
KDM4AO75164 AC087499.5-201ENST00000452760 1342 ntBASIC18.86■□□□□ 0.61
KDM4AO75164 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
KDM4AO75164 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms