Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.57■□□□□ 0.24
OPHN1O60890 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.57■□□□□ 0.24
OPHN1O60890 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.57■□□□□ 0.24
OPHN1O60890 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
OPHN1O60890 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.57■□□□□ 0.24
OPHN1O60890 AC241585.1-201ENST00000433527 519 ntBASIC16.57■□□□□ 0.24
OPHN1O60890 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.57■□□□□ 0.24
OPHN1O60890 AC105233.2-201ENST00000523697 349 ntBASIC16.57■□□□□ 0.24
OPHN1O60890 AF228730.5-201ENST00000530288 346 ntBASIC16.57■□□□□ 0.24
OPHN1O60890 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.57■□□□□ 0.24
OPHN1O60890 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
OPHN1O60890 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
OPHN1O60890 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.56■□□□□ 0.24
OPHN1O60890 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
OPHN1O60890 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
OPHN1O60890 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
OPHN1O60890 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.56■□□□□ 0.24
OPHN1O60890 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
OPHN1O60890 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.56■□□□□ 0.24
OPHN1O60890 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
OPHN1O60890 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 AC098859.1-201ENST00000502915 1238 ntBASIC16.56■□□□□ 0.24
OPHN1O60890 SERBP1P5-201ENST00000510079 1181 ntBASIC16.56■□□□□ 0.24
OPHN1O60890 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.56■□□□□ 0.24
OPHN1O60890 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.56■□□□□ 0.24
OPHN1O60890 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.56■□□□□ 0.24
OPHN1O60890 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 AC025048.6-201ENST00000634326 1161 ntBASIC16.56■□□□□ 0.24
OPHN1O60890 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
OPHN1O60890 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
OPHN1O60890 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
OPHN1O60890 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.56■□□□□ 0.24
OPHN1O60890 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
OPHN1O60890 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.56■□□□□ 0.24
OPHN1O60890 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.55■□□□□ 0.24
OPHN1O60890 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
OPHN1O60890 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
OPHN1O60890 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
OPHN1O60890 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
OPHN1O60890 AC011477.6-201ENST00000604980 1927 ntBASIC16.55■□□□□ 0.24
OPHN1O60890 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms