Protein–RNA interactions for Protein: O60682

MSC, Musculin, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSCO60682 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.61■□□□□ 0.41
MSCO60682 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
MSCO60682 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MSCO60682 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
MSCO60682 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.6■□□□□ 0.41
MSCO60682 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MSCO60682 FAM197Y7-201ENST00000432892 766 ntBASIC17.6■□□□□ 0.41
MSCO60682 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.6■□□□□ 0.41
MSCO60682 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.6■□□□□ 0.41
MSCO60682 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.6■□□□□ 0.41
MSCO60682 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 AP001582.1-201ENST00000525856 295 ntBASIC17.6■□□□□ 0.41
MSCO60682 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.6■□□□□ 0.41
MSCO60682 AC078819.1-201ENST00000547454 765 ntBASIC17.6■□□□□ 0.41
MSCO60682 AC012085.1-201ENST00000548270 765 ntBASIC17.6■□□□□ 0.41
MSCO60682 AC107373.2-201ENST00000607735 490 ntBASIC17.6■□□□□ 0.41
MSCO60682 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.6■□□□□ 0.41
MSCO60682 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.6■□□□□ 0.41
MSCO60682 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.6■□□□□ 0.41
MSCO60682 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 REXO1L1P-202ENST00000608646 1974 ntBASIC17.6■□□□□ 0.41
MSCO60682 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.6■□□□□ 0.41
MSCO60682 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSCO60682 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MSCO60682 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
MSCO60682 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.59■□□□□ 0.41
MSCO60682 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MSCO60682 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 CD8B2-202ENST00000417670 633 ntBASIC17.59■□□□□ 0.41
MSCO60682 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.59■□□□□ 0.41
MSCO60682 MTX1P1-201ENST00000440904 838 ntBASIC17.59■□□□□ 0.41
MSCO60682 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.59■□□□□ 0.41
MSCO60682 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
MSCO60682 AP006547.1-201ENST00000563435 692 ntBASIC17.59■□□□□ 0.41
MSCO60682 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.59■□□□□ 0.41
MSCO60682 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MSCO60682 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 AC020914.3-201ENST00000594712 304 ntBASIC17.59■□□□□ 0.41
MSCO60682 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.59■□□□□ 0.41
MSCO60682 AC005695.3-201ENST00000614522 232 ntBASIC17.59■□□□□ 0.41
MSCO60682 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MSCO60682 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
MSCO60682 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.59■□□□□ 0.41
MSCO60682 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.59■□□□□ 0.41
MSCO60682 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSCO60682 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.41
MSCO60682 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSCO60682 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MSCO60682 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.58■□□□□ 0.41
MSCO60682 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
MSCO60682 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
MSCO60682 AC099398.1-201ENST00000567919 2776 ntBASIC17.58■□□□□ 0.41
MSCO60682 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSCO60682 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.58■□□□□ 0.41
MSCO60682 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.58■□□□□ 0.41
MSCO60682 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms