Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 U82695.1-201ENST00000635752 1889 ntBASIC15.68■□□□□ 0.1
PCDHGA12O60330 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 AC006538.1-201ENST00000567905 1585 ntBASIC15.68■□□□□ 0.1
PCDHGA12O60330 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 RN7SL399P-201ENST00000471648 279 ntBASIC15.68■□□□□ 0.1
PCDHGA12O60330 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 ALOX12P2-203ENST00000570921 1945 ntBASIC15.68■□□□□ 0.1
PCDHGA12O60330 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDHGA12O60330 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDHGA12O60330 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 PCGF3-213ENST00000620529 1899 ntBASIC15.67■□□□□ 0.1
PCDHGA12O60330 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 USP32P1-208ENST00000506594 1164 ntBASIC15.67■□□□□ 0.1
PCDHGA12O60330 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AC233724.13-201ENST00000598383 410 ntBASIC15.67■□□□□ 0.1
PCDHGA12O60330 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AL136982.4-201ENST00000437689 1740 ntBASIC15.67■□□□□ 0.1
PCDHGA12O60330 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA12O60330 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PCDHGA12O60330 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 LINC01144-201ENST00000626198 1710 ntBASIC15.66■□□□□ 0.1
PCDHGA12O60330 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms