Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP2AO43633 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP2AO43633 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.75■□□□□ 0.43
CHMP2AO43633 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CHMP2AO43633 CHCHD2P3-201ENST00000603038 451 ntBASIC17.75■□□□□ 0.43
CHMP2AO43633 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHMP2AO43633 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.75■□□□□ 0.43
CHMP2AO43633 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CHMP2AO43633 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP2AO43633 CICP13-201ENST00000422015 2789 ntBASIC17.75■□□□□ 0.43
CHMP2AO43633 SLC7A15P-201ENST00000424028 1363 ntBASIC17.75■□□□□ 0.43
CHMP2AO43633 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.75■□□□□ 0.43
CHMP2AO43633 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHMP2AO43633 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.74■□□□□ 0.43
CHMP2AO43633 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP2AO43633 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.74■□□□□ 0.43
CHMP2AO43633 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.74■□□□□ 0.43
CHMP2AO43633 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP2AO43633 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 AC055876.2-201ENST00000531834 546 ntBASIC17.74■□□□□ 0.43
CHMP2AO43633 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.74■□□□□ 0.43
CHMP2AO43633 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP2AO43633 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 WASH4P-201ENST00000564273 1246 ntBASIC17.74■□□□□ 0.43
CHMP2AO43633 SPDYE22P-201ENST00000582158 798 ntBASIC17.74■□□□□ 0.43
CHMP2AO43633 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP2AO43633 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 AC007431.3-201ENST00000623221 587 ntBASIC17.74■□□□□ 0.43
CHMP2AO43633 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 AL365203.3-201ENST00000609742 2057 ntBASIC17.74■□□□□ 0.43
CHMP2AO43633 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CHMP2AO43633 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP2AO43633 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHMP2AO43633 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.74■□□□□ 0.43
CHMP2AO43633 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHMP2AO43633 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
CHMP2AO43633 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CHMP2AO43633 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP2AO43633 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP2AO43633 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP2AO43633 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 AC132872.4-202ENST00000622924 2756 ntBASIC17.73■□□□□ 0.43
CHMP2AO43633 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP2AO43633 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.73■□□□□ 0.43
CHMP2AO43633 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 AL353779.1-201ENST00000434793 351 ntBASIC17.73■□□□□ 0.43
CHMP2AO43633 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.73■□□□□ 0.43
CHMP2AO43633 AP005018.1-201ENST00000525475 301 ntBASIC17.73■□□□□ 0.43
CHMP2AO43633 AC140912.1-201ENST00000577171 1054 ntBASIC17.73■□□□□ 0.43
CHMP2AO43633 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.73■□□□□ 0.43
CHMP2AO43633 AC008494.3-201ENST00000606615 944 ntBASIC17.73■□□□□ 0.43
CHMP2AO43633 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.73■□□□□ 0.43
CHMP2AO43633 AL158212.4-201ENST00000624062 1286 ntBASIC17.73■□□□□ 0.43
CHMP2AO43633 AC092127.1-201ENST00000567093 3455 ntBASIC17.73■□□□□ 0.43
CHMP2AO43633 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHMP2AO43633 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.73■□□□□ 0.43
CHMP2AO43633 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
CHMP2AO43633 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CHMP2AO43633 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHMP2AO43633 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHMP2AO43633 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CHMP2AO43633 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms