Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.06■□□□□ 0.16
RIPK2O43353 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RIPK2O43353 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.06■□□□□ 0.16
RIPK2O43353 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.06■□□□□ 0.16
RIPK2O43353 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.06■□□□□ 0.16
RIPK2O43353 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 RPS8P6-201ENST00000426177 609 ntBASIC16.06■□□□□ 0.16
RIPK2O43353 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.06■□□□□ 0.16
RIPK2O43353 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.06■□□□□ 0.16
RIPK2O43353 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RIPK2O43353 AC073389.1-201ENST00000595595 795 ntBASIC16.06■□□□□ 0.16
RIPK2O43353 AC023141.13-201ENST00000604991 943 ntBASIC16.06■□□□□ 0.16
RIPK2O43353 AL445228.2-201ENST00000605589 952 ntBASIC16.06■□□□□ 0.16
RIPK2O43353 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RIPK2O43353 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RIPK2O43353 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RIPK2O43353 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RIPK2O43353 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.06■□□□□ 0.16
RIPK2O43353 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.06■□□□□ 0.16
RIPK2O43353 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.06■□□□□ 0.16
RIPK2O43353 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RIPK2O43353 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RIPK2O43353 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 AL136982.4-201ENST00000437689 1740 ntBASIC16.05■□□□□ 0.16
RIPK2O43353 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.05■□□□□ 0.16
RIPK2O43353 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.05■□□□□ 0.16
RIPK2O43353 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 FOXO1B-201ENST00000504678 1527 ntBASIC16.05■□□□□ 0.16
RIPK2O43353 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.05■□□□□ 0.16
RIPK2O43353 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.05■□□□□ 0.16
RIPK2O43353 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RIPK2O43353 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.05■□□□□ 0.16
RIPK2O43353 FAM8A3P-201ENST00000427218 844 ntBASIC16.05■□□□□ 0.16
RIPK2O43353 AC009947.1-201ENST00000444350 727 ntBASIC16.05■□□□□ 0.16
RIPK2O43353 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.05■□□□□ 0.16
RIPK2O43353 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.05■□□□□ 0.16
RIPK2O43353 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.05■□□□□ 0.16
RIPK2O43353 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.05■□□□□ 0.16
RIPK2O43353 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RIPK2O43353 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.05■□□□□ 0.16
RIPK2O43353 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.05■□□□□ 0.16
RIPK2O43353 UNC93B6-202ENST00000528242 690 ntBASIC16.05■□□□□ 0.16
RIPK2O43353 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.05■□□□□ 0.16
RIPK2O43353 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.05■□□□□ 0.16
RIPK2O43353 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.05■□□□□ 0.16
RIPK2O43353 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.05■□□□□ 0.16
RIPK2O43353 AC007064.4-201ENST00000637740 555 ntBASIC16.05■□□□□ 0.16
RIPK2O43353 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.05■□□□□ 0.16
RIPK2O43353 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.05■□□□□ 0.16
RIPK2O43353 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RIPK2O43353 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
RIPK2O43353 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.05■□□□□ 0.16
RIPK2O43353 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RIPK2O43353 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RIPK2O43353 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RIPK2O43353 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.04■□□□□ 0.16
RIPK2O43353 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RIPK2O43353 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms