Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
O00370 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 AC136621.1-201ENST00000624017 2304 ntBASIC16.86■□□□□ 0.29
O00370 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.86■□□□□ 0.29
O00370 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
O00370 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
O00370 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.85■□□□□ 0.29
O00370 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
O00370 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.85■□□□□ 0.29
O00370 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
O00370 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.85■□□□□ 0.29
O00370 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.85■□□□□ 0.29
O00370 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.85■□□□□ 0.29
O00370 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.85■□□□□ 0.29
O00370 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.85■□□□□ 0.29
O00370 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.85■□□□□ 0.29
O00370 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.85■□□□□ 0.29
O00370 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.85■□□□□ 0.29
O00370 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
O00370 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.85■□□□□ 0.29
O00370 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
O00370 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.85■□□□□ 0.29
O00370 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.84■□□□□ 0.29
O00370 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.84■□□□□ 0.29
O00370 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.84■□□□□ 0.29
O00370 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.84■□□□□ 0.29
O00370 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
O00370 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.84■□□□□ 0.29
O00370 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.84■□□□□ 0.29
O00370 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.84■□□□□ 0.29
O00370 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.84■□□□□ 0.29
O00370 AC009477.1-201ENST00000452936 217 ntBASIC16.84■□□□□ 0.29
O00370 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.84■□□□□ 0.29
O00370 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.84■□□□□ 0.29
O00370 AC004890.2-204ENST00000481968 304 ntBASIC16.84■□□□□ 0.29
O00370 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.84■□□□□ 0.29
O00370 ZNF890P-202ENST00000530367 1156 ntBASIC16.84■□□□□ 0.29
O00370 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.84■□□□□ 0.29
O00370 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.84■□□□□ 0.29
O00370 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.84■□□□□ 0.29
O00370 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.84■□□□□ 0.29
O00370 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
O00370 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
O00370 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.84■□□□□ 0.29
O00370 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
O00370 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 AL607033.1-201ENST00000623900 1599 ntBASIC16.84■□□□□ 0.29
O00370 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
O00370 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
O00370 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.84■□□□□ 0.29
O00370 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
O00370 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
O00370 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
O00370 AC009090.5-201ENST00000624886 2285 ntBASIC16.84■□□□□ 0.29
O00370 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
O00370 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
O00370 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
O00370 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms