Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 UPF3AP3-201ENST00000420996 769 ntBASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AL139010.1-201ENST00000454878 894 ntBASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AC211476.1-201ENST00000503899 468 ntBASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AC004835.2-201ENST00000603762 682 ntBASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AP3S2-216ENST00000617003 1561 ntBASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.53□□□□□ -0.56
TRGV1A0A0A0MS02 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 AL691432.1-201ENST00000596308 1422 ntBASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.52□□□□□ -0.56
TRGV1A0A0A0MS02 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AL353705.2-201ENST00000428243 662 ntBASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AC112482.1-201ENST00000492080 688 ntBASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 RARRES2P9-201ENST00000565168 469 ntBASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AL513210.1-201ENST00000629608 234 ntBASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TRGV1A0A0A0MS02 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms