Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC187A0A096LP49 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 KRT18P25-201ENST00000508931 1278 ntBASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 AC025279.2-201ENST00000569730 653 ntBASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 AL139099.5-201ENST00000635274 300 ntBASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCDC187A0A096LP49 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 AL133267.1-201ENST00000398220 340 ntBASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 AC006033.1-201ENST00000440505 426 ntBASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 GOLGA2P4-201ENST00000441462 777 ntBASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 KRT8P13-201ENST00000463294 1010 ntBASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC187A0A096LP49 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC187A0A096LP49 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms