Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 AC106820.2-201ENST00000563775 3264 ntBASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
CDC42BPBQ9Y5S2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 AC092364.2-201ENST00000596710 2692 ntBASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CDC42BPBQ9Y5S2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 SLC16A6P1-201ENST00000413214 1059 ntBASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 AL596276.2-201ENST00000447525 331 ntBASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 MESTP3-201ENST00000503460 968 ntBASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 AC106794.1-201ENST00000506935 792 ntBASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 AL596087.1-201ENST00000400979 1969 ntBASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 AC005324.6-201ENST00000587972 613 ntBASIC23.25■■□□□ 1.31
CDC42BPBQ9Y5S2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 AP000593.2-201ENST00000542775 1433 ntBASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 AC009090.5-201ENST00000624886 2285 ntBASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 CU633904.3-201ENST00000624042 1029 ntBASIC23.24■■□□□ 1.31
CDC42BPBQ9Y5S2 ILF3-AS1-201ENST00000591501 1983 ntBASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms