Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 AC074044.1-201ENST00000609673 707 ntBASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI2Q9Y5P3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 AC074338.1-201ENST00000416825 156 ntBASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 AC008738.7-201ENST00000609744 511 ntBASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 CICP13-201ENST00000422015 2789 ntBASIC15.98■□□□□ 0.15
RAI2Q9Y5P3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 CICP6-201ENST00000457191 2729 ntBASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 BTBD7P1-201ENST00000447253 1453 ntBASIC15.97■□□□□ 0.15
RAI2Q9Y5P3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms