Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 AC006449.5-201ENST00000610658 2098 ntBASIC16.38■□□□□ 0.21
YIPF1Q9Y548 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
YIPF1Q9Y548 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 FO681548.1-201ENST00000455617 1132 ntBASIC16.37■□□□□ 0.21
YIPF1Q9Y548 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 AP000812.2-201ENST00000538934 718 ntBASIC16.37■□□□□ 0.21
YIPF1Q9Y548 KRT90P-201ENST00000549264 1064 ntBASIC16.37■□□□□ 0.21
YIPF1Q9Y548 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 AC244669.2-201ENST00000612320 853 ntBASIC16.37■□□□□ 0.21
YIPF1Q9Y548 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
YIPF1Q9Y548 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 ACKR1-201ENST00000368121 1240 ntBASIC16.36■□□□□ 0.21
YIPF1Q9Y548 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 AC016694.1-201ENST00000434179 700 ntBASIC16.36■□□□□ 0.21
YIPF1Q9Y548 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms