Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 AC138969.3-201ENST00000546612 1459 ntBASIC18■□□□□ 0.47
PCDHA4Q9UN74 AC138932.2-201ENST00000548268 1459 ntBASIC18■□□□□ 0.47
PCDHA4Q9UN74 AC126755.4-201ENST00000549796 1459 ntBASIC18■□□□□ 0.47
PCDHA4Q9UN74 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDHA4Q9UN74 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18■□□□□ 0.47
PCDHA4Q9UN74 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 AC087481.3-201ENST00000602886 1894 ntBASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 TSPY16P-201ENST00000449843 468 ntBASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDHA4Q9UN74 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 MIR661-201ENST00000384842 89 ntBASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 AL133267.1-201ENST00000398220 340 ntBASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 DOC2GP-202ENST00000514950 1163 ntBASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 AC015910.1-201ENST00000579400 975 ntBASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 AC009118.2-201ENST00000613275 655 ntBASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 TMBIM7P-203ENST00000641617 1718 ntBASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.98■□□□□ 0.47
PCDHA4Q9UN74 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
PCDHA4Q9UN74 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms