Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 MIR8072-201ENST00000614241 80 ntBASIC14.51□□□□□ -0.09
LRFN1Q9P244 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.51□□□□□ -0.09
LRFN1Q9P244 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRFN1Q9P244 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 CDC14C-201ENST00000428251 1719 ntBASIC14.5□□□□□ -0.09
LRFN1Q9P244 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 AC136604.1-201ENST00000418535 575 ntBASIC14.5□□□□□ -0.09
LRFN1Q9P244 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 RN7SL837P-201ENST00000463010 287 ntBASIC14.5□□□□□ -0.09
LRFN1Q9P244 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 SLED1-202ENST00000512051 380 ntBASIC14.5□□□□□ -0.09
LRFN1Q9P244 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 AC092552.1-201ENST00000547243 906 ntBASIC14.5□□□□□ -0.09
LRFN1Q9P244 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 HNRNPUP1-201ENST00000554987 333 ntBASIC14.5□□□□□ -0.09
LRFN1Q9P244 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 WFDC1-204ENST00000613603 549 ntBASIC14.5□□□□□ -0.09
LRFN1Q9P244 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms