Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC093813.1-201ENST00000605066 256 ntBASIC17.71■□□□□ 0.43
COL20A1Q9P218 AC025181.2-201ENST00000606994 802 ntBASIC17.71■□□□□ 0.43
COL20A1Q9P218 AL022328.1-201ENST00000610050 478 ntBASIC17.71■□□□□ 0.43
COL20A1Q9P218 AC011447.5-201ENST00000616168 564 ntBASIC17.71■□□□□ 0.43
COL20A1Q9P218 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL20A1Q9P218 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL20A1Q9P218 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
COL20A1Q9P218 CICP13-201ENST00000422015 2789 ntBASIC17.71■□□□□ 0.43
COL20A1Q9P218 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL20A1Q9P218 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
COL20A1Q9P218 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL20A1Q9P218 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL20A1Q9P218 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL20A1Q9P218 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
COL20A1Q9P218 AC134312.5-201ENST00000568031 1313 ntBASIC17.71■□□□□ 0.42
COL20A1Q9P218 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
COL20A1Q9P218 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
COL20A1Q9P218 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.42
COL20A1Q9P218 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
COL20A1Q9P218 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 AC127383.1-201ENST00000444697 1800 ntBASIC17.7■□□□□ 0.42
COL20A1Q9P218 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 KRT43P-201ENST00000434019 910 ntBASIC17.7■□□□□ 0.42
COL20A1Q9P218 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 CTBP2P5-201ENST00000454986 1264 ntBASIC17.7■□□□□ 0.42
COL20A1Q9P218 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 AC009486.1-201ENST00000569860 813 ntBASIC17.7■□□□□ 0.42
COL20A1Q9P218 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
COL20A1Q9P218 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
COL20A1Q9P218 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 BOLA2P3-201ENST00000404566 256 ntBASIC17.69■□□□□ 0.42
COL20A1Q9P218 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 FTH1P14-201ENST00000482930 551 ntBASIC17.69■□□□□ 0.42
COL20A1Q9P218 AC022137.2-201ENST00000503482 481 ntBASIC17.69■□□□□ 0.42
COL20A1Q9P218 AP005482.1-201ENST00000563722 1273 ntBASIC17.69■□□□□ 0.42
COL20A1Q9P218 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 AC244669.2-201ENST00000612320 853 ntBASIC17.69■□□□□ 0.42
COL20A1Q9P218 AC133552.6-201ENST00000613406 534 ntBASIC17.69■□□□□ 0.42
COL20A1Q9P218 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.69■□□□□ 0.42
COL20A1Q9P218 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COL20A1Q9P218 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms