Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.6■□□□□ 0.09
MKS1Q9NXB0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 CICP14-201ENST00000629111 2732 ntBASIC15.59■□□□□ 0.09
MKS1Q9NXB0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 MIR1224-201ENST00000408193 85 ntBASIC15.59■□□□□ 0.09
MKS1Q9NXB0 GHSR-202ENST00000427970 912 ntBASIC15.59■□□□□ 0.09
MKS1Q9NXB0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 AL135744.1-201ENST00000565098 629 ntBASIC15.59■□□□□ 0.09
MKS1Q9NXB0 AP001005.1-201ENST00000571755 1248 ntBASIC15.59■□□□□ 0.09
MKS1Q9NXB0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MKS1Q9NXB0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 REXO1L2P-201ENST00000425429 2069 ntBASIC15.58■□□□□ 0.09
MKS1Q9NXB0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
MKS1Q9NXB0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 AL355306.1-201ENST00000415580 579 ntBASIC15.58■□□□□ 0.08
MKS1Q9NXB0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 KRT18P2-201ENST00000447938 1258 ntBASIC15.58■□□□□ 0.08
MKS1Q9NXB0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 AC034105.1-201ENST00000563488 319 ntBASIC15.58■□□□□ 0.08
MKS1Q9NXB0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MKS1Q9NXB0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms