Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATAD3AQ9NVI7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATAD3AQ9NVI7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATAD3AQ9NVI7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATAD3AQ9NVI7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.26■□□□□ 0.03
ATAD3AQ9NVI7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AC134407.2-201ENST00000625089 1978 ntBASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AL355306.1-201ENST00000415580 579 ntBASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AL671277.1-201ENST00000429656 993 ntBASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AL135744.1-201ENST00000565098 629 ntBASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AC092865.6-201ENST00000642101 219 ntBASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AC020658.6-201ENST00000623564 1870 ntBASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATAD3AQ9NVI7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 TFAMP1-201ENST00000412727 736 ntBASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AL138918.1-201ENST00000568306 659 ntBASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AC061975.2-201ENST00000581722 295 ntBASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AC027307.2-201ENST00000591252 911 ntBASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AC091812.2-201ENST00000619081 385 ntBASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATAD3AQ9NVI7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms