Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 FO538757.1-201ENST00000623083 1397 ntBASIC13.89□□□□□ -0.19
CDH20Q9HBT6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 DUX4L27-201ENST00000554796 1261 ntBASIC13.89□□□□□ -0.19
CDH20Q9HBT6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 AL133215.2-201ENST00000609242 977 ntBASIC13.89□□□□□ -0.19
CDH20Q9HBT6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 HYMAI-201ENST00000635591 3347 ntBASIC13.89□□□□□ -0.19
CDH20Q9HBT6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 AC024909.3-201ENST00000611513 2257 ntBASIC13.89□□□□□ -0.19
CDH20Q9HBT6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CDH20Q9HBT6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AL138828.2-201ENST00000615812 383 ntBASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AL603832.2-201ENST00000566195 2125 ntBASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 AC011477.6-201ENST00000604980 1927 ntBASIC13.88□□□□□ -0.19
CDH20Q9HBT6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CDH20Q9HBT6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH20Q9HBT6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CDH20Q9HBT6 AL365209.1-201ENST00000624418 6473 ntBASIC13.87□□□□□ -0.19
CDH20Q9HBT6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH20Q9HBT6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDH20Q9HBT6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CDH20Q9HBT6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CDH20Q9HBT6 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CDH20Q9HBT6 KRT8P12-202ENST00000472924 1397 ntBASIC13.87□□□□□ -0.19
CDH20Q9HBT6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CDH20Q9HBT6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms