Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 ACTG1P3-201ENST00000431775 1114 ntBASIC16.96■□□□□ 0.31
NXF3Q9H4D5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 SNX29P1-201ENST00000548357 1007 ntBASIC16.96■□□□□ 0.31
NXF3Q9H4D5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 BTNL10-201ENST00000595971 695 ntBASIC16.96■□□□□ 0.31
NXF3Q9H4D5 AC005252.2-201ENST00000624630 1141 ntBASIC16.96■□□□□ 0.31
NXF3Q9H4D5 AC018665.1-201ENST00000622927 1362 ntBASIC16.96■□□□□ 0.31
NXF3Q9H4D5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
NXF3Q9H4D5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 DRD5P1-201ENST00000456605 1438 ntBASIC16.96■□□□□ 0.3
NXF3Q9H4D5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
NXF3Q9H4D5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 MIR658-201ENST00000385210 100 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 AC234783.1-201ENST00000441761 496 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 AC022210.1-201ENST00000449856 793 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 AC026410.3-201ENST00000514280 936 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 ENPP7P5-201ENST00000541031 1031 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 CLUHP6-201ENST00000580789 941 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 AC233724.13-201ENST00000598383 410 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 AC107373.2-201ENST00000607735 490 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 MIR6805-201ENST00000615055 62 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 MSTO2P-201ENST00000314835 1709 ntBASIC16.95■□□□□ 0.3
NXF3Q9H4D5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
NXF3Q9H4D5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NXF3Q9H4D5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms