Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
NKX6-2Q9C056 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AC105250.1-201ENST00000509378 2057 ntBASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AL591122.2-201ENST00000624125 1853 ntBASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.87□□□□□ -0.35
NKX6-2Q9C056 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AD001527.2-201ENST00000622994 785 ntBASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AC132938.5-201ENST00000624980 1813 ntBASIC12.87□□□□□ -0.35
NKX6-2Q9C056 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AC083964.2-201ENST00000623988 2396 ntBASIC12.87□□□□□ -0.35
NKX6-2Q9C056 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 AC011474.4-201ENST00000623523 2076 ntBASIC12.87□□□□□ -0.35
NKX6-2Q9C056 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
NKX6-2Q9C056 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
NKX6-2Q9C056 LINC01568-207ENST00000641790 1380 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms