Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 AL627223.1-201ENST00000416693 442 ntBASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 AC005237.2-201ENST00000434368 219 ntBASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 FAM86GP-201ENST00000448322 971 ntBASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 PRYP6-201ENST00000514804 343 ntBASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 KRT8P48-201ENST00000515599 1220 ntBASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 AC026120.1-201ENST00000611536 926 ntBASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
FOXP3Q9BZS1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 AC140658.5-201ENST00000438532 169 ntBASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 SPDYE11-202ENST00000450699 704 ntBASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 SPDYE9P-201ENST00000570642 692 ntBASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 SPDYE10P-202ENST00000612005 668 ntBASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 SPDYE8P-202ENST00000612377 668 ntBASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
FOXP3Q9BZS1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
FOXP3Q9BZS1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms