Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 TSPY26P-202ENST00000565928 3884 ntBASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 ZBED1P1-201ENST00000502364 1930 ntBASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 FGD5P1-202ENST00000614866 2498 ntBASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO3Q9BXY4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 LINC01101-201ENST00000622953 1884 ntBASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 FAM45BP-202ENST00000592932 1624 ntBASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 AL080243.2-201ENST00000418783 582 ntBASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 DNAJB3-201ENST00000446806 729 ntBASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO3Q9BXY4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.46□□□□□ -0.1
RSPO3Q9BXY4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.46□□□□□ -0.1
RSPO3Q9BXY4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.46□□□□□ -0.1
RSPO3Q9BXY4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RSPO3Q9BXY4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RSPO3Q9BXY4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RSPO3Q9BXY4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 RPL37AP1-201ENST00000412502 279 ntBASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 AP001059.3-201ENST00000619053 235 ntBASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RSPO3Q9BXY4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms