Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AL136982.4-201ENST00000437689 1740 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 OR2I1P-210ENST00000642037 4691 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 HLA-H-201ENST00000383620 1096 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 TFAMP1-201ENST00000412727 736 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AL671277.1-201ENST00000429656 993 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 EEF1DP4-201ENST00000446006 880 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AL139010.1-201ENST00000454878 894 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 PHKG1P2-201ENST00000457537 863 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 RN7SL589P-201ENST00000481268 310 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 RNA5SP416-201ENST00000516838 111 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC148477.4-201ENST00000613430 1793 ntBASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SHANK2-AS3Q9BTD1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 CYP4F24P-201ENST00000586049 1580 ntBASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 AGAP7P-201ENST00000582299 2062 ntBASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 AGAP14-201ENST00000624701 2060 ntBASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.19□□□□□ -0.46
SHANK2-AS3Q9BTD1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 470 ms