Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 CICP13-201ENST00000422015 2789 ntBASIC11.08□□□□□ -0.64
UPK3BQ9BT76 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.08□□□□□ -0.64
UPK3BQ9BT76 AL080243.2-201ENST00000418783 582 ntBASIC11.08□□□□□ -0.64
UPK3BQ9BT76 TSSK5P-201ENST00000423978 907 ntBASIC11.08□□□□□ -0.64
UPK3BQ9BT76 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.08□□□□□ -0.64
UPK3BQ9BT76 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.08□□□□□ -0.64
UPK3BQ9BT76 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 AC009118.2-201ENST00000613275 655 ntBASIC11.08□□□□□ -0.64
UPK3BQ9BT76 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 OR2I1P-209ENST00000641730 5365 ntBASIC11.08□□□□□ -0.64
UPK3BQ9BT76 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.08□□□□□ -0.64
UPK3BQ9BT76 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 AC022144.1-201ENST00000602255 1580 ntBASIC11.07□□□□□ -0.64
UPK3BQ9BT76 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 KRT8P12-202ENST00000472924 1397 ntBASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.07□□□□□ -0.64
UPK3BQ9BT76 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms