Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
VRK1Q99986 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VRK1Q99986 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 MIR346-201ENST00000362234 95 ntBASIC14.06□□□□□ -0.16
VRK1Q99986 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VRK1Q99986 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.06□□□□□ -0.16
VRK1Q99986 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.06□□□□□ -0.16
VRK1Q99986 BASP1P1-201ENST00000430708 665 ntBASIC14.06□□□□□ -0.16
VRK1Q99986 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.06□□□□□ -0.16
VRK1Q99986 INGX-202ENST00000489074 768 ntBASIC14.06□□□□□ -0.16
VRK1Q99986 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.06□□□□□ -0.16
VRK1Q99986 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.06□□□□□ -0.16
VRK1Q99986 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VRK1Q99986 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.06□□□□□ -0.16
VRK1Q99986 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.06□□□□□ -0.16
VRK1Q99986 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.06□□□□□ -0.16
VRK1Q99986 AC084121.4-201ENST00000641598 221 ntBASIC14.06□□□□□ -0.16
VRK1Q99986 AF228730.8-201ENST00000642140 221 ntBASIC14.06□□□□□ -0.16
VRK1Q99986 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VRK1Q99986 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VRK1Q99986 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VRK1Q99986 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK1Q99986 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VRK1Q99986 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.05□□□□□ -0.16
VRK1Q99986 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK1Q99986 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VRK1Q99986 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 AC138969.2-201ENST00000532739 9932 ntBASIC14.05□□□□□ -0.16
VRK1Q99986 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.05□□□□□ -0.16
VRK1Q99986 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.05□□□□□ -0.16
VRK1Q99986 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.05□□□□□ -0.16
VRK1Q99986 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK1Q99986 TREML5P-201ENST00000421694 576 ntBASIC14.05□□□□□ -0.16
VRK1Q99986 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.05□□□□□ -0.16
VRK1Q99986 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.05□□□□□ -0.16
VRK1Q99986 AL512638.1-201ENST00000457493 794 ntBASIC14.05□□□□□ -0.16
VRK1Q99986 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK1Q99986 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.05□□□□□ -0.16
VRK1Q99986 AC051619.7-201ENST00000568314 623 ntBASIC14.05□□□□□ -0.16
VRK1Q99986 MIR4453-201ENST00000584019 89 ntBASIC14.05□□□□□ -0.16
VRK1Q99986 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.05□□□□□ -0.16
VRK1Q99986 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.05□□□□□ -0.16
VRK1Q99986 AL096865.1-201ENST00000606796 927 ntBASIC14.05□□□□□ -0.16
VRK1Q99986 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.05□□□□□ -0.16
VRK1Q99986 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
VRK1Q99986 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VRK1Q99986 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms