Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC20.42■□□□□ 0.86
ABCA3Q99758 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC20.42■□□□□ 0.86
ABCA3Q99758 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ABCA3Q99758 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ABCA3Q99758 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.42■□□□□ 0.86
ABCA3Q99758 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ABCA3Q99758 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC20.42■□□□□ 0.86
ABCA3Q99758 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ABCA3Q99758 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC20.42■□□□□ 0.86
ABCA3Q99758 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC20.42■□□□□ 0.86
ABCA3Q99758 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ABCA3Q99758 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC20.41■□□□□ 0.86
ABCA3Q99758 RPL18P13-201ENST00000478088 569 ntBASIC20.41■□□□□ 0.86
ABCA3Q99758 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ABCA3Q99758 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
ABCA3Q99758 NEU3-205ENST00000531619 582 ntTSL 5 BASIC20.41■□□□□ 0.86
ABCA3Q99758 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
ABCA3Q99758 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC20.41■□□□□ 0.86
ABCA3Q99758 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ABCA3Q99758 AL157813.1-201ENST00000612996 587 ntBASIC20.41■□□□□ 0.86
ABCA3Q99758 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
ABCA3Q99758 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
ABCA3Q99758 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 E2F3P2-201ENST00000447755 1422 ntBASIC20.41■□□□□ 0.86
ABCA3Q99758 AMT-204ENST00000427987 1646 ntTSL 5 BASIC20.41■□□□□ 0.86
ABCA3Q99758 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.41■□□□□ 0.86
ABCA3Q99758 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.41■□□□□ 0.86
ABCA3Q99758 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 AC022616.1-201ENST00000518688 554 ntBASIC20.41■□□□□ 0.86
ABCA3Q99758 AC087045.2-201ENST00000606279 1003 ntBASIC20.41■□□□□ 0.86
ABCA3Q99758 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ABCA3Q99758 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.4■□□□□ 0.86
ABCA3Q99758 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ABCA3Q99758 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.4■□□□□ 0.86
ABCA3Q99758 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ABCA3Q99758 OR2K2-202ENST00000374428 1038 ntBASIC20.4■□□□□ 0.86
ABCA3Q99758 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 TUBB8P8-201ENST00000458717 1058 ntBASIC20.4■□□□□ 0.86
ABCA3Q99758 PGAM1P5-201ENST00000548011 764 ntBASIC20.4■□□□□ 0.86
ABCA3Q99758 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC20.4■□□□□ 0.86
ABCA3Q99758 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.4■□□□□ 0.86
ABCA3Q99758 AC092171.5-201ENST00000608012 942 ntBASIC20.4■□□□□ 0.86
ABCA3Q99758 AL136301.1-201ENST00000615830 422 ntBASIC20.4■□□□□ 0.86
ABCA3Q99758 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
ABCA3Q99758 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.4■□□□□ 0.86
ABCA3Q99758 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.4■□□□□ 0.86
ABCA3Q99758 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 FAM90A7P-201ENST00000382628 1395 ntBASIC20.4■□□□□ 0.86
ABCA3Q99758 FAM90A23P-201ENST00000400136 1395 ntBASIC20.4■□□□□ 0.86
ABCA3Q99758 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ABCA3Q99758 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.4■□□□□ 0.86
ABCA3Q99758 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
ABCA3Q99758 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ABCA3Q99758 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ABCA3Q99758 KRT8P21-201ENST00000430398 1491 ntBASIC20.39■□□□□ 0.86
ABCA3Q99758 AC069224.1-201ENST00000566372 1715 ntBASIC20.39■□□□□ 0.86
ABCA3Q99758 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.39■□□□□ 0.86
ABCA3Q99758 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.39■□□□□ 0.86
ABCA3Q99758 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.39■□□□□ 0.86
ABCA3Q99758 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ABCA3Q99758 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.39■□□□□ 0.85
ABCA3Q99758 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.39■□□□□ 0.85
ABCA3Q99758 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.39■□□□□ 0.85
ABCA3Q99758 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ABCA3Q99758 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ABCA3Q99758 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ABCA3Q99758 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.39■□□□□ 0.85
ABCA3Q99758 AC025271.4-201ENST00000621477 1726 ntBASIC20.39■□□□□ 0.85
ABCA3Q99758 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ABCA3Q99758 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ABCA3Q99758 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ABCA3Q99758 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ABCA3Q99758 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms