Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 COX5BP8-201ENST00000416911 349 ntBASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 AC239800.4-201ENST00000603712 296 ntBASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDK5RAP1Q96SZ6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 MIR8072-201ENST00000614241 80 ntBASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDK5RAP1Q96SZ6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 PCDH8P1-201ENST00000428983 2773 ntBASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 WASH4P-201ENST00000564273 1246 ntBASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 AC015910.1-201ENST00000579400 975 ntBASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 BRI3BPP1-201ENST00000594224 787 ntBASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDK5RAP1Q96SZ6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDK5RAP1Q96SZ6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms