Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC099398.1-201ENST00000567919 2776 ntBASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 SOCS2P1-201ENST00000417727 557 ntBASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 ACTG1P3-201ENST00000431775 1114 ntBASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 CTBP2P5-201ENST00000454986 1264 ntBASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 MIR6799-201ENST00000620297 69 ntBASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 AL033527.4-201ENST00000641026 673 ntBASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC85AQ96PX6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 REXO1L6P-201ENST00000603433 1515 ntBASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC85AQ96PX6 AC124067.4-201ENST00000519691 2379 ntBASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 AC093525.8-201ENST00000624099 1342 ntBASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 AC005252.2-201ENST00000624630 1141 ntBASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 AC010491.1-201ENST00000563101 2797 ntBASIC19.52■□□□□ 0.72
CCDC85AQ96PX6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CCDC85AQ96PX6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.52■□□□□ 0.71
CCDC85AQ96PX6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCDC85AQ96PX6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CCDC85AQ96PX6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.52■□□□□ 0.71
CCDC85AQ96PX6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 PRORSD1P-202ENST00000563365 2154 ntBASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC85AQ96PX6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms