Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AL355864.2-201ENST00000447420 863 ntBASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AL355994.2-201ENST00000447882 704 ntBASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 CSF2RBP1-201ENST00000447905 391 ntBASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 FAM8A2P-201ENST00000528813 1142 ntBASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 MIR4538-201ENST00000581377 78 ntBASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 AC000095.1-201ENST00000603208 874 ntBASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNGAP1Q96PV0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 REXO1L1P-202ENST00000608646 1974 ntBASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 AL391005.1-201ENST00000623953 2435 ntBASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 AC092933.1-201ENST00000393644 945 ntBASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 VDAC1P7-201ENST00000462417 847 ntBASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 CLUHP6-201ENST00000580789 941 ntBASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNGAP1Q96PV0 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 AC092364.2-201ENST00000596710 2692 ntBASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SYNGAP1Q96PV0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms