Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 AC011477.6-201ENST00000604980 1927 ntBASIC15.01□□□□□ -0.01
COL21A1Q96P44 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL21A1Q96P44 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.01□□□□□ -0.01
COL21A1Q96P44 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15□□□□□ -0.01
COL21A1Q96P44 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 AP3S2-216ENST00000617003 1561 ntBASIC15□□□□□ -0.01
COL21A1Q96P44 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15□□□□□ -0.01
COL21A1Q96P44 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15□□□□□ -0.01
COL21A1Q96P44 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15□□□□□ -0.01
COL21A1Q96P44 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15□□□□□ -0.01
COL21A1Q96P44 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
COL21A1Q96P44 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
COL21A1Q96P44 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL21A1Q96P44 TSEN15P1-201ENST00000423257 515 ntBASIC14.99□□□□□ -0.01
COL21A1Q96P44 GPS2P2-201ENST00000430745 888 ntBASIC14.99□□□□□ -0.01
COL21A1Q96P44 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.99□□□□□ -0.01
COL21A1Q96P44 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms